Resources for 3D imaging

Here are some resources to help others generate and process 3D datasets....
Pre-scan

DiceCT

Lab protocols for using diffusible iodine-based contrast-enhanced CT to stain natural history specimens for soft tissue imaging.
Diffusion Diaries: IOB publication
oVert diceCT protocol infographic
Scanning

CT scanning

Resources for CT scanning and reconstruction I have authored/co-aurthored.
X-ray CT terminology
Recommendations for CT data repository upload
Recommendations for CT data reuse
List of 3D data repositories
Post-scan

Scan post-processing

Enhancement, segmentation, and visualisation of CT scan data.
Stack editing/enhancement in ImageJ/Fiji
VGStudio Max segmentation/visualisation guide 
3D Slicer Quick Guide (Interactive PDF)
Colors of Skull anatomy terminology table (for 3D Slicer)
Post-scan

3D modelling

Working with meshes to create interactive 3D models.
Meshlab tutorials 
Blender tutorials 
Get in touch with me if you would like to request a 3D imaging resource or arrange to discuss CT projects!